FinnGen-hankkeen julkaisut: FinnGen-julkaisut
2025
Associations of mucinous differentiation and mucin expression with immune cell infiltration and prognosis in colorectal adenocarcinoma
Elomaa, H., Tarkiainen, V., Äijälä, V.K. et al. Br J Cancer. (2025). DOI: 10.1038/s41416-025-02960-3 Epub ahead of print.
CDX2 and SATB2 loss are associated with myeloid cell infiltration and poor survival in colorectal cancer
Sirniö, P., Elomaa, H., Tuomisto, A. et al. Cancer Immunol Immunother. (2025) 74(4):111. DOI: 10.1007/s00262-025-03964-x
Comprehensive characterization of micropapillary colorectal adenocarcinoma
Äijälä VK., Härkönen J., Mantere T. et al. J Pathol. (2025). DOI: 10.1002/path.6392 Online ahead of print.
2024
CD3+ and CD8+ T cell-based immune cell score as a prognostic factor in clear-cell renal cell carcinoma
Åkerla J., Helminen O., Väyrynen JP. et al. Acta Oncol. (2024) 63:105-110. DOI: 10.2340/1651-226X.2024.19690
Detection of a major Lynch Syndrome-causing MLH1 founder variant in a large-scale genotyped cohort
Sipilä, L.J., Aavikko, M., Ravantti, J. et al. Familial Cancer 23, 647–652 (2024). https://doi.org/10.1007/s10689-024-00400-4
TWINGEN – protocol for an observational clinical biobank recall and biomarker study to identify individuals with high risk of Alzheimer’s disease
Vuoksimaa, E., Saari, T.T., Aaltonen A. et al. BMJ Open. (2024);14(6): e081947. DOI: 10.1136/bmjopen-2023-081947
Quantitative Multiplexed Analysis of Indoleamine 2,3-Dioxygenase (IDO) and Arginase-1 (ARG1) Expression and Myeloid Cell Infiltration in Colorectal Cancer
Elomaa H., Härkönen J., Väyrynen SA. et al. Mod Pathol. (2024) 37(4):100450. DOI: 10.1016/j.modpat.2024.100450
Establishing Criteria for Tumor Necrosis as Prognostic Indicator in Colorectal Cancer
Kastinen M., Sirniö P., Elomaa H. et al. Am J Surg Pathol. (2024)48(10):1284-1292. DOI: 10.1097/PAS.0000000000002286
2023
Immunological and prognostic significance of tumour necrosis in colorectal cancer
Kastinen M., Sirniö P., Elomaa H. et al. Br J Cancer. (2023) 128(12):2218-2226. DOI: 10.1038/s41416-023-02258-2
Domain-specific transfer learning in the automated scoring of tumor-stroma ratio from histopathological images of colorectal cancer
Petäinen L., Väyrynen JP., Ruusuvuori P. et al. PLoS One. (2023) 18(5): e0286270. doi: 10.1371/journal.pone.0286270
2020
Comparison of two laboratory developed PD-L1 assays with clinically approved Ventana SP142 assay and prognostic significance of PD-L1-positivity and immune cell densities in triple-negative breast cancer patients
Lehto, N. Pro gradu -tutkielma. https://urn.fi/URN:NBN:fi:jyu-202012157155
2018
Performance of Finnish biobanks in nationwide pulmonary carcinoid tumour research Vesterinen, T., Salmenkivi, K., Mustonen, H. et al. Virchows Arch 476, 273–283 (2020). doi: https://doi.org/10.1007/s00428-019-02625-6 .
The validity of rheumatoid arthritis diagnoses in Finnish biobanks
Paltta, J., Heikkilä, HK., Pirilä, L. et al. Scand J Rheumatol (2023); 52:1–9. https://doi.org/10.1080/03009742.2021.1967047